BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B05LP1|AL425808
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1590 0.0
>3x_Contig1677
Length = 15081
Score = 1590 bits (802), Expect = 0.0
Identities = 802/802 (100%)
Strand = Plus / Minus
Query: 1 atctcttctctctaacaatacaccactttctggaaattcggctttattattaaaccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10687 atctcttctctctaacaatacaccactttctggaaattcggctttattattaaaccaaaa 10628
Query: 61 aagaaaaaattaaaacaataattaacaacaaaactctctctattctgcagtatgtttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10627 aagaaaaaattaaaacaataattaacaacaaaactctctctattctgcagtatgtttgca 10568
Query: 121 atatactcttgtctgttccggtgaatcacaactgcttaataatcgcacaaaatatgtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10567 atatactcttgtctgttccggtgaatcacaactgcttaataatcgcacaaaatatgtata 10508
Query: 181 aaccagtaatatatttaagctttcgagtgtcgtttttttcatcaattgtttaaactcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10507 aaccagtaatatatttaagctttcgagtgtcgtttttttcatcaattgtttaaactcttc 10448
Query: 241 tcgattaaattaaattgttaattcttcactaaagaagatacaaaggaaagaaagaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10447 tcgattaaattaaattgttaattcttcactaaagaagatacaaaggaaagaaagaaagaa 10388
Query: 301 aaaaaaaaaaaaattcgttgatataatcgcaaatagtatcgactaatggatagtacagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387 aaaaaaaaaaaaattcgttgatataatcgcaaatagtatcgactaatggatagtacagag 10328
Query: 361 agcgagaataatcgatactggggtctagatatgtttagtatgatgcgggcaagatacgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10327 agcgagaataatcgatactggggtctagatatgtttagtatgatgcgggcaagatacgta 10268
Query: 421 gagttatagtgttaaataagttcccgctatggtggaacgggaggtagaatataggttgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10267 gagttatagtgttaaataagttcccgctatggtggaacgggaggtagaatataggttgta 10208
Query: 481 ggagatacgatgcgatatatgtaagtatactttctggcaaagcctcaagaatttcatttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10207 ggagatacgatgcgatatatgtaagtatactttctggcaaagcctcaagaatttcatttt 10148
Query: 541 tttggtggggcaggaaaaagcctgacggtgtcgtatgggtcggaattgactccatagact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10147 tttggtggggcaggaaaaagcctgacggtgtcgtatgggtcggaattgactccatagact 10088
Query: 601 cttaccgcccttcacgggcactaccacgatataccgttttctaaagctctgtgtactttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10087 cttaccgcccttcacgggcactaccacgatataccgttttctaaagctctgtgtactttt 10028
Query: 661 atggaaagaataaacgctgttgcttggtctggggttgcatgctgaaggcactgaatccct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10027 atggaaagaataaacgctgttgcttggtctggggttgcatgctgaaggcactgaatccct 9968
Query: 721 tctctcaaatttaaggaatattatctgtcattttactgaataactacaaaacctattatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9967 tctctcaaatttaaggaatattatctgtcattttactgaataactacaaaacctattatg 9908
Query: 781 aacgttcactgtgaatgcgaat 802
||||||||||||||||||||||
Sbjct: 9907 aacgttcactgtgaatgcgaat 9886
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,391
Number of Sequences: 1807
Number of extensions: 17391
Number of successful extensions: 2442
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)